Both the recipe unsetting and the Storage Chest corruption seem to be caused by mods.
I was able to reproduce the issue with these steps:

1. Enable FUN mod and its dependencies.
2. Start a new game
3. open a blueprint that uses a filtered Storage Chest
4. close the blueprint. as far as I'm aware ...

Game crashes when clicking logistics chests.
They come from a specific blueprint that seems to be corrupted. It doesn't matter whether the logistics chest have been built or are still a ghost. Their item filter is set, and they're connected to a circuit network in read mode. Exporting and re ...